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News

ECDC awards 77 M€ to strengthen EU/EEA Member States’ capacities to detect and identify SARS-CoV-2 variants

News story - 3 Sep 2021

ECDC has awarded more than 77 M€ to 24 EU/EEA countries to strengthen whole genome sequencing and RT-PCR infrastructures within the countries’ national public health programmes.

  • Coronavirus
  • COVID-19
  • EU/EEA
  • Laboratories
  • Laboratory capacity
  • SARS-CoV-2 variants
  • Surveillance

News

ECDC supports EU/EEA Member States in rapid detection of SARS-CoV-2 variants

News story - 16 Jun 2021

ECDC and the European Commission’s Directorate-General for Health and Food Safety (DG SANTE) have launched a number of activities to help strengthen EU/EEA Member States’ capacity for detection of SARS-CoV-2 variants in the shorter and longer term. These activities are one of five action areas of the ‘HERA Incubator’, a new EU bio-defence preparedness plan against SARS-CoV-2 variants launched by the European Commission on 17 February 2021.

  • Coronavirus
  • COVID-19
  • EU/EEA
  • Laboratories
  • Microbiology
  • SARS-CoV-2 variants
  • Whole genome sequencing

Publication

Seventh external quality assessment scheme for Listeria monocytogenes typing

External quality assessment - 10 Jun 2021

This report presents the results of the seventh round of the external quality assessment (EQA-7) scheme for Listeria monocytogenes (L. monocytogenes) typing organised for national public health reference laboratories (NPHRLs) providing data to the Food- and Waterborne Diseases and Zoonoses Network (FWD-Net) managed by ECDC.

Seventh external quality assessment scheme for Listeria monocytogenes typing - EN - [PDF-1.47 MB]
  • Laboratories
  • Listeriosis
  • Microbiology
  • Whole genome sequencing

Publication

Tenth external quality assessment scheme for Salmonella typing

External quality assessment - 25 May 2021

ECDC is supporting a large number of targeted External Quality Assessment (EQA) schemes with voluntary participation by reference or primary laboratories, which are active members of EU surveillance networks.

Tenth external quality assessment scheme for Salmonella typing - EN - [PDF-20.4 MB]
  • Food- and waterborne diseases
  • Foodborne diseases
  • Laboratories
  • Laboratory guideline
  • Salmonellosis

Publication

Laboratory standard operating procedure for detecting sporadic Creutzfeldt-Jakob disease using Real- Time Quaking-Induced Conversion (RT-QuIC) assay

Technical report - 8 Feb 2021

This document provides laboratories with a single protocol for producing recombinant full-length hamster prion protein and using it to perform the Real-Time Quaking-Induced Conversion assay (RT-QuIC), which can distinguish sporadic Creutzfeldt-Jakob disease (sCJD) from variant Creutzfeldt-Jakob disease (vCJD).

Laboratory standard operating procedure for detecting sporadic Creutzfeldt-Jakob disease using Real- Time Quaking-Induced Conversion (RT-QuIC) assay - EN - [PDF-1.98 MB]
  • EU/EEA
  • Laboratories
  • Variant Creutzfeldt-Jakob disease (vCJD)

Publication

Sequencing of SARS-CoV-2 - first update

Technical guidance - 18 Jan 2021

This technical guidance aims to provide guidelines to laboratories and relevant stakeholders in the European Union (EU), European Economic Area (EEA) and other countries in the WHO European region in making decisions on establishing sequencing capacities and capabilities, in making decisions on which technologies to use and/or in deciding on the role of sequencing for SARS-CoV-2 diagnostics, research, outbreak investigations and surveillance.

Sequencing of SARS-CoV-2 - first update, 18 January 2021 - EN - [PDF-592 KB]
  • Coronavirus
  • COVID-19
  • Diagnostic test
  • EU/EEA
  • Laboratories
  • Laboratory based surveillance
  • Microbiology
  • Molecular typing
  • Public health threat
  • Surveillance
  • Whole genome sequencing

Publication

ECDC rapid assessment of laboratory practices and needs related to COVID-19

Technical report - 18 Jan 2021

This report assesses the current status of the EU/EEA and the UK COVID-19 laboratory response based on a short survey sent to all Member States and the UK.

ECDC rapid assessment of laboratory practices and needs related to COVID-19 - EN - [PDF-400.12 KB]
  • Coronavirus
  • COVID-19
  • EU/EEA
  • Laboratories
  • Laboratory capacity
  • Microbiology
  • Public health threat
  • Surveillance

Peer-Reviewed Publication

Impact of the COVID-19 pandemic on tuberculosis laboratory services in Europe

Jan 2021 - Eur Respir J - 57(1)

V. Nikolayevskyy, Y. Holicka, D. van Soolingen, M. J. van der Werf, C. Ködmön, E. Surkova, D. Hillemann, R. Groenheit and D. Cirillo

  • Coronavirus
  • COVID-19
  • Europe
  • Laboratories
  • Laboratory capacity
  • Tuberculosis

Peer-Reviewed Publication

Reporting of interferon-gamma release assay results close to cut-off values

Jan 2021 - Int J Tuberc Lung Dis - 25(1):66-68

Folkvardsen, D.B., Holicka, Y., Ködmön, C., van der Werf, M.J., Lillebaek, T., Nikolayevskyy, V.

  • Laboratories
  • Microbiology
  • Reference laboratory
  • Tuberculosis

Peer-Reviewed Publication

Variable sensitivity in molecular detection of SARS-CoV-2 in European Expert Laboratories: External Quality Assessment, June - July 2020

Dec 2020 - J Clin Microbiol - Online ahead of print(JCM.02676-20)

C. Fischer, R. Mögling, A. Melidou, A. Kühne, E. F. Oliveira-Filho, T. Wolff, J. Reiche, E. Broberg, A. Meijer, K. Leitmeyer, J. F. Drexler and C. Reusken

  • Coronavirus
  • COVID-19
  • Europe
  • Influenza
  • Laboratories
  • Microbiology
  • Middle East respiratory syndrome coronavirus
  • Reference laboratory
  • Surveillance

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